Import all Panaroo-derived outputs into DuckDB

Source: R/data_processing.R

Wrapper that loads gene counts, gene names, struct tables, and reference sequence tables from a Panaroo output directory into a DuckDB database.

.panaroo2duckdb(panaroo_output_path, duckdb_path)

Arguments

panaroo_output_path

Path to a Panaroo result directory.

duckdb_path

Path to a DuckDB database file.

Value

Invisibly returns TRUE.