Publications

Janani Ravi, Kewalin Samart, Jason Zwolak (2024). Modeling the START transition in the budding yeast cell cycle. PLoS Comp Biol.

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Janani Ravi, Vivek Anantharaman, Samuel Chen, Evan Brenner, Pratik Datta, L Aravind, Maria L Gennaro (2024). The phage shock protein (PSP) envelope stress response: discovery of novel partners and evolutionary history. mSystems.

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Joshua M Lensmire, Michael R Wischer, Lo Sosinski, Elliot Ensink, Jack P Dodson, John C Shook, Phillip C Delekta, Christopher C Cooper, Daniel Havlichek Jr, Martha H Mulks, Sophia Y Lunt, Janani Ravi, Neal D Hammer (2023). The glutathione import system satisfies the Staphylococcus aureus nutrient sulfur requirement and promotes interspecies competition. PLoS Genetics.

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Mary J Cantoria, Elaheh Alizadeh, Janani Ravi, Nawat Bunnag, Arminja N Kettenbach, Yashi Ahmed, Andrew L Paek, John J Tyson, Konstantin Doubrovinski, Ethan Lee, Curtis A Thorne (2023). Feedback in the β-catenin destruction complex imparts bistability and cellular memory. PNAS.

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Brian Y Hsueh, Geoffrey B Severin, Clinton A Elg, Evan J Waldron, Abhiruchi Kant, Alex J Wessel, John A Dover, Christopher R Rhoades, Benjamin J Ridenhour, Kristin D Parent, Matthew B Neiditch, Janani Ravi, Eva M Top, Chris M Waters (2022). Phage defence by deaminase-mediated depletion of deoxynucleotides in bacteria. Nat Micro.

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Rocio Joo, Andrea Sanchez-Tapia, Sara Mortara, Yanina Bellini Saibene, Heather Turner, Dorothea Hug Peter, Natalia Soledad Morandeira, Matthias Bannert, Batool Almazrouq, Elizabeth Hare, Laura Acion, Juan Pablo Narvaez-Gomez, Marcela Alfaro Cordoba, Federico Marini, Rita Giordano, Silvia Canelon, Anicet Ebou, Adithi Upadhya, Joselyn Chavez, Janani Ravi (2022). Ten simple rules to host an inclusive conference. PLoS CompBio.

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Helen C Blaine, Joseph Burke, Janani Ravi, Christina L Stallings (2022). DciA Helicase Operators Exhibit Diversity across Bacterial Phyla. J Bac.

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Kayla N Conner, Joseph Burke, Janani Ravi, Jonathan W Hardy (2022). Novel Internalin P homologs in Listeria ivanovii londoniensis and Listeria seeligeri. Micro Genom.

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Jacob Krol, Joseph Burke, Samuel Chen, Lo Sosinski, John B Johnston, Janani Ravi (2022). MolEvolvR: a web-app for characterizing proteins using molecular evolution and phylogeny. bioRxiv.

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Kewalin Samart, Phoebe Tuyishime, Arjun Krishnan, Janani Ravi (2021). Reconciling Multiple Connectivity Scores for Drug Repurposing. Brief Bioinform.

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Janani Ravi, Antonella Fioravanti (2021). S-layers: the proteinaceous multifunctional armours of Gram-positive pathogens. Front Micro.

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Syeda Anum Hadi, Ida V Kolte, Evan Brenner, EAT Cunha, V Simonsen, L Ferrazoli, DAM Villela, RS Santos, Janani Ravi, Srinand Sreevatsan, Paulo C Basta (2021). Discovery of a predominant and distinct lineage of Mycobacterium tuberculosis in Brazilian indigenous population. Scientific Reports.

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Joshua M Lensmire, Jack P Dodson, Brian Y Hsueh, Michael R Wischer, Phillip C Delekta, John C Shook, Elizabeth N Ottosen, Paige J Kies, Janani Ravi, Neal D Hammer (2019). The Staphylococcus aureus cystine transporters, TcyABC and TcyP, facilitate nutrient sulfur acquisition during infection. IAI.

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Janani Ravi, Vivek Anantharaman, L Aravind, Maria L Gennaro (2018). Variations on a theme: evolution of the phage-shock-protein system in Actinobacteria. Anto.

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Rinki Chauhan, Janani Ravi, Pratik Datta, Tian Chen, Dirk Schnappinger, Kevin E Bassler, Gabor Balázsi, Maria L Gennaro (2016). Reconstruction and topological characterization of the sigma factor regulatory network of Mycobacterium tuberculosis. Nat Comm.

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Pratik Datta, Janani Ravi, Valentina Guerrini, Rinki Chauhan, Matt B Neiditch, Scarlet S Shell, Sarah M Fortune, Baris Hancioglu, Oleg A Igoshin, Maria L Gennaro (2015). The Psp system of Mycobacterium tuberculosis integrates envelope stress-sensing and envelope-preserving functions. Mol Micro.

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Hugh Salamon, Natalie Bruiners, Karim Lakehal, Lanbo Shi, Janani Ravi, Ken D Yamaguchi, Richard Pine, Maria L Gennaro (2014). Cutting edge: Vitamin D regulates lipid metabolism in Mycobacterium tuberculosis infection. J Imm.

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