Function to generate MSA using kalign
Usage
createMSA_Kalign(fa_file = "", outfile = "")
Arguments
- fa_file
Character. The path to the input FASTA file containing protein
sequences.
- outfile
Character. The path to the output file where the alignment
will be saved.
Value
A list containing the alignment object and the output file path.
Examples
if (FALSE) { # \dontrun{
createMSA_Kalign(fa_file = "path/to/sequences.fasta",
outfile = "path/to/alignment.txt")
} # }