Lineage Domain Repeats Plot

Lineage Domain Repeats Plot

Usage

plotLineageDomainRepeats(query_data, colname, query_DAdoms)

Arguments

query_data

Data frame containing protein homolog data, including relevant domain architectures and lineages.

colname

Character. The name of the column in query_data that contains domain architectures or other structural information.

query_DAdoms

List or data frame containing 'domains' element, character vector of domain names. (NEW ARGUMENT)

Value

A ggplot object representing a heatmap (tile plot) of domain repeat counts across different lineages, with color intensity representing the occurrence of domains.

Examples

if (FALSE) { # \dontrun{
plotLineageDomainRepeats()
} # }