proteinAcc2TaxID
Arguments
- accnums
A character vector of protein accession numbers to be mapped to TaxIDs.
- suffix
A string suffix used to name the output file generated by the script.
- out_path
A string specifying the directory where the output file will be saved.
- return_dt
A logical indicating whether to return the result as a data table. Defaults to FALSE. If TRUE, the output file is read into a data table and returned.
Value
If return_dt is TRUE, a data table containing the mapping of protein
accession numbers to TaxIDs. If FALSE, the function returns NULL.
Examples
if (FALSE) { # \dontrun{
# Example accession numbers
accessions <- c("ABC123", "XYZ456", "LMN789")
tax_data <- proteinAcc2TaxID(accessions, suffix = "example",
out_path = "/path/to/output", return_dt = TRUE)
tax_data
} # }