Wordclouds for the predominant domains (from DAs) and DAs (from GC)
Usage
wordcloud_element(
query_data = "prot",
colname = "DomArch",
cutoff = 70,
UsingRowsCutoff = FALSE
)
Arguments
- query_data
Data frame of protein homologs with the usual 11 columns +
additional word columns (0/1 format). Default is "prot".
- UsingRowsCutoff
Details
For "da2doms" you would need the file DA.doms.wc as well as the
column query_data$DomArch.norep
For "gc2da", you would need the file GC.DA.wc as well as the column
query_data$GenContext.norep
Note
Please refer to the source code if you have alternate file formats and/or
column names.
Examples
if (FALSE) { # \dontrun{
wordcloud_element(prot, "da2doms", 10)
} # }