Plot Top Feature Importances

Creates a bar plot showing the most important features affecting AMR phenotype predictions.

plotTopFeatsVI(topfeat, n_top_feats = 10)

Arguments

topfeat

A tibble of feature importance scores (e.g. the output of extractTopFeats() or runMLmodels()), with Variable, Importance, and Sign columns, or a path to a TSV file containing the same.

n_top_feats

Number of top features to display (default: 10).

Value

A bar plot of variable importance (ggplot2 object).

Examples

data(demo_fit)
top_feats <- extractTopFeats(demo_fit, n_top_feats = 10)
plotTopFeatsVI(top_feats, n_top_feats = 10)